FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005469020

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005469020
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1273823
Sequences flagged as poor quality0
Sequence length150
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACTGCGC4100.002710103812.2926831
CGCCCGG7201.3595505E-511.05
CCGTGCC5500.002013311710.4727272
ACCGTGC4850.00947847310.3917521
CTCACGC9352.1704582E-610.0106953
GCTCACG10307.049857E-79.7864072
CGATCTC9653.4191322E-58.9533685
CCCGGCC11754.214404E-68.5787237
ACGCCTG13302.5344016E-68.1203016
CGCCTGT13553.3051238E-67.970487
CACGCCT14458.228781E-67.47404865
GCCCGGC14901.2678995E-57.2483226
TCACGCC14255.5095927E-57.0736844
ACCTGTA20505.503134E-76.6731718
CCTGTAA41200.06.64077669
TCACACC18152.8712724E-56.34710744
CACACCT22704.714948E-76.34361275
GCTCACA17401.0969891E-46.20689632
GGCTCAC38209.094947E-126.0314131
CACCTGT25204.802423E-75.99999957
Produced by FastQC (version 0.11.5)