FastQCFastQC Report
Tue 28 Jun 2022
EGAF00005469756

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005469756
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74524281
Sequences flagged as poor quality0
Sequence length85
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG3039050.4077932667340997No Hit
AGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG2579140.3460804942217423No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGCCAATATCTCGTATGC2383470.31982462199132117TruSeq Adapter, Index 6 (100% over 50bp)
TTTTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG2017900.2707708109253681No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1404760.18849695443556175No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)