FastQCFastQC Report
Fri 1 Jul 2022
EGAF00005469770

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005469770
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences45312330
Sequences flagged as poor quality0
Sequence length85
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG3224510.7116186697969404No Hit
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG2999220.6618993108498282No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGATCAGATCTCGTATGC2658800.5867718565785516TruSeq Adapter, Index 9 (100% over 50bp)
AGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG2152130.4749546094848798No Hit
TTTTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1841670.40643904208854414No Hit
ATTTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG529700.11689974892043734No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)