FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005471210

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005471210
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19125940
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTGTAG108500.0102.957451
ATACTAG192050.0100.59921
CGTGTAC66600.092.149171
CGTAGGG54400.085.007522
ATACTTG218900.083.087451
ACGTAGG64450.082.467081
TAAGTAG233100.082.078821
CGTAGCC54200.081.334232
TATGTAG208200.080.533831
CGAGTAC47050.079.703941
CGTACCC38250.078.904882
GTAGTAG211800.078.8585361
CTACTAG177300.078.299341
CGTAGGC71650.077.3092352
TGACTAG217750.076.637491
TCGTAGG45800.076.21071
CGTACGG17400.074.515132
TAGTAGG249000.073.56452
CGGTAGG46350.073.128081
ACGTAGC54850.073.1028441
Produced by FastQC (version 0.11.5)