FastQCFastQC Report
Fri 26 Aug 2022
EGAF00005472688

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005472688
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences212036313
Sequences flagged as poor quality0
Sequence length8
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGACGCCC7285642434.36035222891279No Hit
CTGACTGA4926312723.23334446963337No Hit
ACCGTATG4710913022.217482153634695No Hit
GATTAGAT4280763220.188821147819148No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)