FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005474302

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005474302
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21395879
Sequences flagged as poor quality0
Sequence length35-100
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGAATC21253.237801E-106.1166782
CAAAAAT275300.05.7188141
ATCGGAC16850.0031465.557390794
CCGAAAT26201.6807462E-95.31780531
Produced by FastQC (version 0.11.5)