FastQCFastQC Report
Fri 13 May 2022
EGAF00005478105

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005478105
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences810495091
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCGGAAGAGCACACGTCTGAACTCCAGTCACCGTTAGAAATCTCGTATG34264960.4227657931613555TruSeq Adapter, Index 2 (97% over 36bp)
ATATTTTTTAGGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT32198320.3972673043617484No Hit
ATATTTTTTAGTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA28315210.3493569586592351No Hit
ATATTTTTTAGGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC10019180.12361802201217775No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)