FastQCFastQC Report
Fri 13 May 2022
EGAF00005478115

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005478115
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences980149717
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATATACGCAGTGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT75218300.7674164333814729No Hit
ATATACGCAGTTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA51121780.5215711346269766No Hit
ATCGGAAGAGCACACGTCTGAACTCCAGTCACACCTTGGCATCTCGTATG17100460.1744678359173571TruSeq Adapter, Index 8 (97% over 36bp)
ATATACGCAGTGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC12881030.1314190044295039No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)