FastQCFastQC Report
Fri 13 May 2022
EGAF00005478117

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005478117
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1032264306
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCATCAGCGCGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT101556960.9838271013509209No Hit
TGCATCAGCGCTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA50305450.4873311002579605No Hit
ATCGGAAGAGCACACGTCTGAACTCCAGTCACGAATGAGAATCTCGTATG37443800.36273461924779565TruSeq Adapter, Index 7 (97% over 34bp)
TGCATCAGCGCGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC32605540.3158642588965001No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)