FastQCFastQC Report
Fri 13 May 2022
EGAF00005478119

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005478119
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences976930707
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TATTATGCTTCGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT68328660.6994217656421767No Hit
TATTATGCTTCTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA50484900.5167705307885261No Hit
ATCGGAAGAGCACACGTCTGAACTCCAGTCACCGGACAACATCTCGTATG36229470.37084994606480315TruSeq Adapter, Index 22 (97% over 37bp)
TATTATGCTTCGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC16693940.1708815157552418No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)