FastQCFastQC Report
Thu 26 May 2022
EGAF00005478120

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005478120
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences976930707
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TATTATGCTTCGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT58481570.5986255686402536No Hit
TATTATGCTTCTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA48274390.49414343979669784No Hit
ATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAATCCGGAGTGTAGATCTC31806140.32557211859653423Illumina Single End PCR Primer 1 (96% over 32bp)
TATTATGCTTCGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC14457480.14798879691679093No Hit

[OK]Adapter Content

Adapter graph