FastQCFastQC Report
Fri 13 May 2022
EGAF00005478125

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005478125
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1024983071
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCGGAAGAGCACACGTCTGAACTCCAGTCACCAACAATGATCTCGTATG103403921.0088353937311028TruSeq Adapter, Index 23 (97% over 36bp)
TCACCTGTCGGGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT62263070.6074546181455909No Hit
TCACCTGTCGGTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA44439650.43356472177285355No Hit
TCACCTGTCGGGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC14496240.1414290675635949No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)