FastQCFastQC Report
Fri 13 May 2022
EGAF00005478131

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005478131
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences772297828
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTAACAAGTATGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT32061580.4151452825269373No Hit
ATCGGAAGAGCACACGTCTGAACTCCAGTCACATGGCATGATCTCGTATG26263340.34006751084634673TruSeq Adapter, Index 15 (97% over 38bp)
TTAACAAGTATTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA19652810.25447190562343525No Hit
TTAACAAGTATGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC8494490.1099898211807479No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)