FastQCFastQC Report
Fri 13 May 2022
EGAF00005478151

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005478151
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences932072076
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TACCGAGTCTCGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT51384810.5512965287032159No Hit
TACCGAGTCTCTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA34046380.36527625788458873No Hit
ATCGGAAGAGCACACGTCTGAACTCCAGTCACTTACAGGAATCTCGTATG28841540.30943465363509076TruSeq Adapter, Index 4 (97% over 36bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)