FastQCFastQC Report
Fri 13 May 2022
EGAF00005478152

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005478152
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences932072076
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TACCGAGTCTCGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT45013480.48293990517531604No Hit
TACCGAGTCTCTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA38579900.41391541484180244No Hit
ATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTGCTTGTCAGTGTAGATCTC27432780.294320371850728Illumina Single End PCR Primer 1 (96% over 31bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)