FastQCFastQC Report
Thu 16 Jun 2022
EGAF00005478163

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005478163
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences102272418
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT1473530.14407892458355684No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT1032310.1009372830121216No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)