FastQCFastQC Report
Tue 28 Jun 2022
EGAF00005478166

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005478166
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences114013427
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATT1654520.1451162414405805No Hit
CTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGA1209090.10604803590370106No Hit
CGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGG1203270.105537569710978No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)