FastQCFastQC Report
Thu 16 Jun 2022
EGAF00005478220

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005478220
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences95253919
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGT2122300.2228044811468597Illumina Single End PCR Primer 1 (100% over 50bp)
GGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATT1273030.13364594479309558No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)