FastQCFastQC Report
Tue 28 Jun 2022
EGAF00005478230

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005478230
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences94187887
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGA1820210.1932530878413272No Hit
GGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATT1522460.16164074261481204No Hit
GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGA1299230.1379402427830237No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)