FastQCFastQC Report
Tue 28 Jun 2022
EGAF00005479872

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005479872
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences49081732
Sequences flagged as poor quality0
Sequence length25-101
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGGAGGTCACTCTCCCCAGGCTCTGTCCAAGTGGCATAGGGGAGCTTA864230.17607976833417371No Hit
CATTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACC712960.1452597475574008No Hit
TTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGA520870.106122986857921No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)