FastQCFastQC Report
Thu 12 May 2022
EGAF00005480072

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005480072
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences49330237
Sequences flagged as poor quality0
Sequence length25-101
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGA1070650.21703727067031933No Hit
CTGGGAGGTCACTCTCCCCAGGCTCTGTCCAAGTGGCATAGGGGAGCTTA671630.13614976145360908No Hit
CATTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACC612030.12406792207383881No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)