FastQCFastQC Report
Thu 12 May 2022
EGAF00005480123

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005480123
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40279934
Sequences flagged as poor quality0
Sequence length25-101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGA698940.17352064181634458No Hit
GCCGGCTTCACGCTCAGGAGAAAACGCTACCTCTCTTCCTCGTGGTTTTC664620.16500027035794051No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)