FastQCFastQC Report
Thu 12 May 2022
EGAF00005480149

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005480149
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33257116
Sequences flagged as poor quality0
Sequence length25-101
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATG1713330.5151769624281312No Hit
GCCGGCTTCACGCTCAGGAGAAAACGCTACCTCTCTTCCTCGTGGTTTTC1216680.3658405016237728No Hit
CTGGGCTCTTCCCTGTTCACTCGCCGTTACTGAGGGAATCCTGGTTAGTT693560.20854484195202014No Hit
ATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCAT626310.18832360569088433No Hit
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGA616990.18552119792948973No Hit
TCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATC540370.162482519530557No Hit
GGGCTCTTCCCTGTTCACTCGCCGTTACTGAGGGAATCCTGGTTAGTTTC379400.11408084814089112No Hit
CTCAGGAGAAAACGCTACCTCTCTTCCTCGTGGTTTTCGGTGCTCTACAC348150.10468436288943396No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)