FastQCFastQC Report
Fri 1 Jul 2022
EGAF00005480192

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005480192
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences43370071
Sequences flagged as poor quality0
Sequence length25-101
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGA668730.1541915852524198No Hit
CTGGGAGGTCACTCTCCCCAGGCTCTGTCCAAGTGGCATAGGGGAGCTTA594590.13709684727055207No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)