FastQCFastQC Report
Fri 1 Jul 2022
EGAF00005480376

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005480376
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences60215735
Sequences flagged as poor quality0
Sequence length25-101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGGAGGTCACTCTCCCCAGGCTCTGTCCAAGTGGCATAGGGGAGCTTA1006730.16718719783126454No Hit
TTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGA757990.12587905802362123No Hit
CATTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACC608780.10109982050372714No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)