FastQCFastQC Report
Fri 1 Jul 2022
EGAF00005480659

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005480659
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences48531694
Sequences flagged as poor quality0
Sequence length25-101
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGAT2803130.5775875039515415No Hit
GCCGGCTTCACGCTCAGGAGAAAACGCTACCTCTCTTCCTCGTGGTTTTC1100270.22671164126271795No Hit
CGGCTTCACGCTCAGGAGAAAACGCTACCTCTCTTCCTCGTGGTTTTCGG527660.10872482629598712No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)