FastQCFastQC Report
Wed 11 May 2022
EGAF00005481369

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005481369
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences56545827
Sequences flagged as poor quality0
Sequence length51
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGAAACAGAGTCGTGGAGGCTTTGAATCTCTCAGAAAAAAGGAAAGACAG781890.1382754557644015No Hit
GCCGGCTTCACGCTCAGGAGAAAACGCTACCTCTCTTCCTCGTGGTTTTCG657280.11623846265437059No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)