FastQCFastQC Report
Tue 28 Jun 2022
EGAF00005481477

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005481477
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences54269884
Sequences flagged as poor quality0
Sequence length51
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CATTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCG810480.14934249721263454No Hit
CCGAAAACCACGAGGAAGAGAGGTAGCGTTTTCTCCTGAGCGTGAAGCCGG762240.1404535893240531No Hit
TTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAA741820.1366909131407025No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)