FastQCFastQC Report
Tue 28 Jun 2022
EGAF00005481604

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005481604
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74374741
Sequences flagged as poor quality0
Sequence length51
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGAT4386750.5898171800020117No Hit
ACTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGA1226370.16489065824108215No Hit
CACTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACG1074780.14450873852454826No Hit
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCGATACGGAGAGAAGAACGAT873360.11742696354398062No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)