FastQCFastQC Report
Wed 11 May 2022
EGAF00005481620

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005481620
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53944504
Sequences flagged as poor quality0
Sequence length51
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGAAAACCACGAGGAAGAGAGGTAGCGTTTTCTCCTGAGCGTGAAGCCGG760300.14094114202996472No Hit
TTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAA724150.1342398106023924No Hit
CATTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCG695350.12890099054391158No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)