FastQCFastQC Report
Wed 11 May 2022
EGAF00005481975

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005481975
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences56962816
Sequences flagged as poor quality0
Sequence length51
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCTCGTCCAACCAGCTGCCACGTCCTGTAACCAAAAGTGACCGGGATGAA1061420.18633559127413926No Hit
GGGGAAACAGAGTCGTGGAGGCTTTGAATCTCTCAGAAAAAAGGAAAGACA1015080.17820045975255155No Hit
GGGGGAAACAGAGTCGTGGAGGCTTTGAATCTCTCAGAAAAAAGGAAAGAC866160.1520570893124385No Hit
CTCGTACTGAGACTCAAGGCCGTCTCCACAACTCCAACCAGTGCAAATGAC724550.12719701217018484No Hit
GGGAAACAGAGTCGTGGAGGCTTTGAATCTCTCAGAAAAAAGGAAAGACAG724490.1271864789830615No Hit
GTGCAAATTAAATTCAGAAGGGACGGGGGAAACAGAGTCGTGGAGGCTTTG700510.12297671519610265No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)