FastQCFastQC Report
Thu 12 May 2022
EGAF00005482532

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005482532
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences48935355
Sequences flagged as poor quality0
Sequence length0-98
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[FAIL]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAG8062331.6475470546806088No Hit
CGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGCAGC1925040.3933842923996362No Hit
GGATGTGAGGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAG1541840.3150769009441129No Hit
GTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCGGAA1376770.28134464335652615No Hit
GAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCAGGCGGA1254360.2563300092540455No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG882870.1804155707054746No Hit
CCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGT816760.16690591086955434No Hit
GACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGCAGCT560980.1146369531803744No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)