FastQCFastQC Report
Sat 4 Jun 2022
EGAF00005482560

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005482560
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66091669
Sequences flagged as poor quality0
Sequence length0-98
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[FAIL]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCGGAA1959950.29655023540107606No Hit
GCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAG1561200.23621736651861522No Hit
CGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGCAGC1270130.19217702007192466No Hit
GGATGTGAGGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAG837130.12666195492808632No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)