FastQCFastQC Report
Sat 4 Jun 2022
EGAF00005482710

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005482710
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences54752539
Sequences flagged as poor quality0
Sequence length0-98
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[FAIL]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCGGAA1753070.3201805855980487No Hit
CGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGCAGC1048940.19157833027615395No Hit
GCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAG827000.15104322376721196No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)