FastQCFastQC Report
Thu 12 May 2022
EGAF00005482818

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005482818
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences49709794
Sequences flagged as poor quality0
Sequence length25-101
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGGGAGAAGAACGA1229670.2473697637934287No Hit
CTCAGACCGCGTTCTCTGCCTCTCACTCCCCAATACGGAGAGAAGAACGA879060.17683839124338355No Hit
GCCGGCTTCACGCTCAGGAGAAAACGCTACCTCTCTTCCTCGTGGTTTTC875610.17614436302029335No Hit
CCGCGTTCTCTGCCTCTCACTCCCCAATACGGAGAGAAGAACGATCATCA691260.13905911579516905No Hit
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGA599600.1206200934970682No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)