FastQCFastQC Report
Sat 4 Jun 2022
EGAF00005482898

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005482898
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences45259872
Sequences flagged as poor quality0
Sequence length25-101
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGAT3408900.7531837474043233No Hit
TCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGGGAGAAGAACGAT2377030.5251959174785117No Hit
TCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGGGAAAAGAACGAT1503340.3321573688940172No Hit
GCCGGCTTCACGCTCAGGAGAAAACGCTACCTCTCTTCCTCGTGGTTTTC790350.17462488625685904No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)