FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005483107

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005483107
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12446811
Sequences flagged as poor quality0
Sequence length6
%GC60

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGG1324401.0640476504383332No Hit
GGGGTG558650.44882982476394956No Hit
GGGGGT546750.4392691429154022No Hit
GTGGGG543880.4369633314107525No Hit
TGGGGG534250.4292264098812138No Hit
GGGTGG511500.4109486357589908No Hit
GGTGGG506320.4067869271896231No Hit
CGGGGG470070.37766300139047665No Hit
GGGCGG424710.3412199317560137No Hit
GGCGGG415910.334149847699945No Hit
GGGGGC414970.33339463417577403No Hit
GCGGGG414820.33327412137936374No Hit
AGGGGG410570.3298595921477397No Hit
GGGGAG387000.31092301473847395No Hit
GGGGGA385900.3100392542314654No Hit
GAGGGG373740.30026968353580685No Hit
GGGGCG363150.29176148010924247No Hit
GGAGGG349300.28063413190736164No Hit
GGGAGG337560.2712019970416519No Hit
TTGGGG272750.21913243480599165No Hit
GGGTTG266910.21444046993241883No Hit
GGGGTT260700.20945124016103403No Hit
GTGGTG257760.20708918935139292No Hit
GTTGGG250980.20164201095364911No Hit
GTGTGG250860.20154560071652086No Hit
GGTTGG248740.19984235319392255No Hit
TGGTGG237780.19103688486954612No Hit
GTGGGT232640.1869073130458878No Hit
GGGTGT228590.18365346754281076No Hit
GGTGGT228340.183452612882127No Hit
TGGGTG226500.18197432257949445No Hit
TCGGGG223090.17923466500776786No Hit
GGTGTG219170.17608526392824636No Hit
CGGGTG213370.1714254358003829No Hit
TGGGGT212490.17071842739477605No Hit
ATGGGG210480.16910355592287857No Hit
GTCGGG210330.1689830431264683No Hit
TGCGGG209170.16805107750089562No Hit
TGTGGG208140.1672235562988785No Hit
GGGCTG200700.16124612159692953No Hit
GGGGTA199800.16052304481846796No Hit
GGGGAT199040.15991244664998933No Hit
CTGGGG197410.15860287426233113No Hit
GGGGTC196940.15822526750024565No Hit
GGTCGG196790.15810475470383537No Hit
AGGTGG194860.15655415672335668No Hit
CGGGGT192110.15434475545583523No Hit
CGGTGG190080.15271381561108305No Hit
GGGTAG188950.1518059525447924No Hit
GGCCGG188020.15105877320704877No Hit
GTGCGG187780.15086595273279235No Hit
TAGGGG185680.1491787735830487No Hit
GTAGGG185540.14906629497306578No Hit
GGGCAG185400.14895381636308289No Hit
GGGCGT185070.1486886882109803No Hit
TGGCGG184970.1486083463467068No Hit
GCGGTG184040.14786116700896318No Hit
GGCGTG183770.1476442439754247No Hit
AGGGGT180590.14508937269152716No Hit
CAGGGG179510.1442216805573733No Hit
GGCTGG179360.14410116776096304No Hit
GAGGGT178260.14321740725395446No Hit
TGGGGC176410.14173108276489457No Hit
GCCGGG176300.1416427067141937No Hit
GCGTGG175940.14135347600280906No Hit
GGCGGT175750.1412008264606894No Hit
GCGGGT175590.1410722794778518No Hit
AGGGTG174940.14055005736007398No Hit
GGATGG173030.13901552775245No Hit
CCGGGG171380.13768988699193713No Hit
CGTGGG171100.1374649297719713No Hit
GTGGAG169640.1362919385535781No Hit
TGGGGA168950.1357375796900909No Hit
GTGGGC168890.1356893745715268No Hit
GCTGGG168180.1351189473351849No Hit
TGAGGG166570.13382544332038143No Hit
GAGTGG164070.1318168967135437No Hit
AGTGGG163030.13098134132509925No Hit
CGCGGG162720.13073228154585137No Hit
GGGATG162640.13066800805443257No Hit
GTGGGA162280.13037877734304795No Hit
GGAGTG162180.13029843547877445No Hit
GGCAGG159880.12845057260048376No Hit
TGGGAG159860.12843450422762906No Hit
GGGTGC159670.1282818546855094No Hit
GATGGG159370.12804082909268888No Hit
GGTGGC158980.1277274958220222No Hit
GGGTCG158750.12754270953419314No Hit
GGTAGG158190.1270927950942615No Hit
GTGAGG157860.1268276669421589No Hit
GGGGCT156150.12545382106308192No Hit
GGTGAG155280.12475484684390244No Hit
GAGGTG154800.12436920589538958No Hit
AGCGGG154390.12403980425186821No Hit
GGAGGT153380.12322835142270579No Hit
TGGGCG152860.12281057372848353No Hit
AAGGGG151180.12146083040868862No Hit
ACGGGG150570.12097074503662023No Hit
GCAGGG149200.11987006149607317No Hit
TTGGTG149070.11976561707251761No Hit
GGGCCG148950.1196692068353894No Hit
CGGCGG148140.11901843773477398No Hit
GGGGAA148090.11897826680263723No Hit
GTTTGG148020.11892202749764577No Hit
GCGCGG147370.11839980537986798No Hit
GTGGCG146890.11801416443135515No Hit
GGTGGA143990.11568425036742341No Hit
GGGTGA143500.11529057523248325No Hit
CGGGGC143340.11516202824964562No Hit
CGAGGG142190.1142380968105003No Hit
TGGTTG141690.11383638748913277No Hit
GGACGG141190.11343467816776522No Hit
GGCGGC140760.11308920815138915No Hit
GGGTTT140730.11306510559210708No Hit
GGGAAG140080.11254288347432928No Hit
GGGAGT138980.1116591229673207No Hit
GGGGAC137900.11079143083316684No Hit
GTGTTG137710.11063878129104716No Hit
GGGCGC137010.11007638824113261No Hit
TTTGGG136280.109489892631936No Hit
AGGGGC135240.10865433724349154No Hit
GAGGAG134440.10801160232930347No Hit
CGGGGA133630.10736083322868806No Hit
GTGGTT131920.10598698734961107No Hit
GGGCGA131310.10549690197754268No Hit
AGGCGG130340.10471758589408965No Hit
GAAGGG129860.10433194494557682No Hit
GCGGGC129800.10428373982701272No Hit
TGGAGG129430.10398647492920075No Hit
GGGGCC127730.10262066323655111No Hit
GCGGAG127620.10253228718585025No Hit
AGAGGG126870.10192972320379895No Hit
GGCGGA126520.10164852667884168No Hit
GAGCGG126440.10158425318742285No Hit
GGTGCG126360.10151997969600406No Hit
GGAAGG126270.10144767201815791No Hit
GAGGGC126170.10136733015388438No Hit
GGTGTT125690.10098168920537155No Hit
GGCGAG125080.10049160383330316No Hit
GGGGCA124830.1002907491726194No Hit
CGGGCG124510.10003365520694417No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)