FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005483157

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005483157
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8165456
Sequences flagged as poor quality0
Sequence length6
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGG445860.5460319668613731No Hit
GGGGGT226740.2776819812635081No Hit
GGTGGG207830.25452344608800787No Hit
GTGGGG200950.2460977072192906No Hit
AGGGGG185680.22739697574758838No Hit
TGGGGG182750.22380868870030038No Hit
GGGTGG180800.22142057957326572No Hit
GGGGTG168750.20666328983953863No Hit
GGGGGA167220.20478954267832686No Hit
GGGAGG166990.20450786826847148No Hit
CGGGGG163240.1999153507164817No Hit
GGGGAG157520.19291023061051338No Hit
GCGGGG156770.19199172710011542No Hit
GAGGGG156480.19163657240942822No Hit
GGGGGC154070.1886851144626828No Hit
GGAGGG150080.1837986757873657No Hit
GGCGGG144990.17756509863013162No Hit
GGGTGT124030.15189598719287692No Hit
GGTGGT120660.14776884475282212No Hit
GTGTGG117990.14449897225580544No Hit
GGGGTT115950.14200064270752302No Hit
GGTTGG113500.1390001979068897No Hit
CGGGGT110620.13547314442696157No Hit
GGGTTG109230.13377085125435736No Hit
GTGGGT108170.1324726996263283No Hit
GTTGGG106010.1298274095163822No Hit
TAGGGG105280.12893339943292817No Hit
TGTGGG105040.12863947830960085No Hit
GGATGG103960.12731683325462778No Hit
GGTAGG103070.12622687575562222No Hit
TGGGGT99850.12228343401764702No Hit
TGGTGG98280.12036070000254731No Hit
CTGGGG97380.11925849579006978No Hit
GGGGTA96440.11810730472370434No Hit
ATGGGG96200.11781338360037699No Hit
AGTGGG96080.11766642303871332No Hit
TCGGGG95580.11705408736511469No Hit
TTGGGG94170.11532730076556656No Hit
GTAGGG94160.11531505405209458No Hit
AAGGGG94050.11518034020390289No Hit
GGGGAT91810.11243707638618101No Hit
TGGGTG91550.11211866183590971No Hit
AGGGGT91040.11149407944883911No Hit
GGAGGT90410.11072253650010483No Hit
GGCTGG90400.11071028978663286No Hit
GGGGCG89860.11004896725914633No Hit
GGCAGG89140.1091672038891643No Hit
GGGGCT87830.1075628844243359No Hit
AGGTGG87110.10668112105435386No Hit
GGTGTG86540.10598305838645142No Hit
GGGCGG85440.10463591990453441No Hit
CGTGGG84330.10327653470914545No Hit
AGAGGG83860.10270093917596274No Hit
GAGGGT83820.10265195232207484No Hit
GGGAGT83650.1024437581930513No Hit
ACGGGG83290.1020028765080603No Hit
CGGTGG83290.1020028765080603No Hit
GTGGTG82720.10130481384015785No Hit
GTGGGC82260.1007414650204471No Hit
TGGGGA82220.10069247816655923No Hit
GGTCGG82100.10054551760489555No Hit
AGGAGG82020.10044754389711977No Hit
GGTGGA81850.10023934976809623No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)