EGAF00005483812 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005483812
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7661997
Sequences flagged as poor quality	0
Sequence length	151
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AGATCGGAAGAGCACACGTCTGAACTCCAGTCCATCTCGTATGCCGTCTT	380960	4.972071902403512	Illumina Multiplexing PCR Primer 2.01 (96% over 32bp)
ACTGCAATTTCCACAGGGGTAGTCGATCCGATGTTTACTCGGATGGAAAA	15749	0.20554693508754965	No Hit
ACTGCAATTTCCACAGGGGTAGTCGATCCGATGTTTACTCGGATGCAAAA	13470	0.17580273132448368	No Hit
ACTGCAATTTCCACAGGGGTAGTCGATCCGATGTTTACTCGGATGGAAAT	11451	0.14945189876738402	No Hit
ACTGCAATTTCCACAGGGGTAGTCGATCCGATGTTTACTCGGATGCATTT	9785	0.12770822019376932	No Hit
ACTGCAATTTCCACAGGGGTAGTCGATCCGATGTTTACTCGGATGGAAGA	9224	0.12038636924551131	No Hit
ACTGCAATTTCCACAGGGGTAGTCGATCCGATGTTTACTCGGATGGAAAG	8494	0.11085882701337524	No Hit
ACTGCAATTTCCACAGGGGTAGTCGATCCGATGTTTACTCGGATGCTTTT	8427	0.10998438135645316	No Hit
ACTGCAATTTCCACAGGGGTAGTCGATCCGATGTTTACTCGGATGGGAAA	8264	0.1078569986388666	No Hit
ACTGCAATTTCCACAGGGGTAGTCGATCCGATGTTTACTCGGATGCAAAG	7722	0.10078312481719844	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CTGCAAT	194560	142.01175	2
ACTGCAA	196550	141.27724	1
CCGCAAT	26630	139.5052	2
ACCGCAA	27140	137.40643	1
TGCAATT	218790	134.70468	3
CGCAATT	29010	132.84215	3
CGGCAAT	3370	113.62306	2
GCAATTT	309000	108.86788	4
CAATTTC	309930	108.47321	5
AATTTCC	309845	108.1343	6
TTTCCAC	309560	107.50615	8
TTCCACA	310535	107.409004	9
ATTTCCA	312655	106.8738	7
ACGGCAA	4195	91.86035	1
ATTGCAA	9285	89.66187	1
GGCAATT	4485	86.670525	3
TCGCAAT	1245	65.94697	2
GCAATTC	5320	61.45796	4
ATGCAAT	17105	58.789368	2
AATGCAA	12035	56.06426	1