EGAF00005483830 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005483830
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3988335
Sequences flagged as poor quality	0
Sequence length	151
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AGATCGGAAGAGCACACGTCTGAACTCCAGTCCATCTCGTATGCCGTCTT	213473	5.352434035756776	Illumina Multiplexing PCR Primer 2.01 (96% over 32bp)
ACTGCAATTTCCACAGGGGTAGTCGATCCGATGTTTACTCGGATGGAAAA	7787	0.19524438142733747	No Hit
ACTGCAATTTCCACAGGGGTAGTCGATCCGATGTTTACTCGGATGCAAAA	6531	0.16375254335455774	No Hit
ACTGCAATTTCCACAGGGGTAGTCGATCCGATGTTTACTCGGATGGAAAT	5468	0.13709981734232457	No Hit
ACTGCAATTTCCACAGGGGTAGTCGATCCGATGTTTACTCGGATGCATTT	4841	0.12137897142541938	No Hit
ACTGCAATTTCCACAGGGGTAGTCGATCCGATGTTTACTCGGATGGAAAG	4446	0.11147508922896396	No Hit
ACTGCAATTTCCACAGGGGTAGTCGATCCGATGTTTACTCGGATGGAAGA	4413	0.11064767628596896	No Hit
ACTGCAATTTCCACAGGGGTAGTCGATCCGATGTTTACTCGGATGGGAAA	4000	0.10029247793878901	No Hit

Adapter graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACTGCAA	92695	141.27644	1
CTGCAAT	93650	139.3085	2
CCGCAAT	12340	137.08992	2
ACCGCAA	12420	136.79051	1
TGCAATT	111545	129.2944	3
CGCAATT	14030	128.4292	3
CGGCAAT	1535	120.45858	2
GCAATTT	153305	106.53775	4
AATTTCC	154465	106.36207	6
CAATTTC	153890	106.27277	5
TTTCCAC	154470	105.527245	8
ATTTCCA	155585	105.27424	7
TTCCACA	155800	104.811226	9
ATTGCAA	4890	94.43	1
ACGGCAA	2105	88.64266	1
GGCAATT	2165	88.41808	3
TATGCAA	2685	87.88218	1
ATGCAAT	11525	68.390305	2
CATGCAA	2840	67.49123	1
ACGCAAT	1330	64.87857	2