FastQCFastQC Report
Fri 1 Jul 2022
EGAF00005484062

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005484062
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66938890
Sequences flagged as poor quality0
Sequence length76
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA929410.1388445491103901No Hit
CCCGTATCGAAGGCCTTTTTGGACAGGTGGTGTGTGGTGGCCTTGGTATG729860.10903377692698518No Hit
GTTTGGATGTAAAGTGAAATATTAGTTGGCGGATGAAGCAGATAGTGAGG669970.10008681052225395No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)