FastQCFastQC Report
Fri 1 Jul 2022
EGAF00005484444

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005484444
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences58050118
Sequences flagged as poor quality0
Sequence length35-76
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGG693160.1194071646848332No Hit
CGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGG602620.10381029716425383No Hit
GGTCGACCCGTGCGGAGGAGCGAGGAGGAAGGACGCGCGAGGGCCGGGAC582110.10027714327815837No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)