FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005485705

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005485705
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18799892
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGACGCT25250.094.4513856
ACGACGC29600.081.060655
CACGACG31250.077.012614
GACGCTC36300.065.300267
CTACACG44950.055.3469661
TACACGA45050.054.9947052
ACGCTCT45100.052.8842858
ACACGAC54100.044.8870773
CGCTCTT56900.041.7896659
TCTTCCG82100.06.587252610-14
CTTCCGA89950.06.383115310-14
ACCGGAT15050.00434526755.86883071
TAACCCT696300.05.73626236
CTAACCC733100.05.5966355
AACCCTA745300.05.4909881
ACCCTAA758200.05.4715912
CCTAACC760150.05.4070154
CCCTAAC772800.05.36540753
TTCCGAT111900.05.325377510-14
TCCGATC111500.05.30514115-19
Produced by FastQC (version 0.11.5)