FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005485755

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005485755
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19102411
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGAA28300.083.753221
TTTGCGC30800.081.7053761
TGCGCGA28250.080.793991
TTACGCG13900.080.30659
ACGACCG27800.075.7862851
GCGCTAG31450.071.642871
GTGCGAC31600.071.071291
ATAACGC36800.070.570541
CGTTGCG16450.069.179687
GGCGACT39450.068.240741
GACGCGT27950.067.004061
GTTACGC29500.066.587418
AACCGCG37000.066.432481
CGGTACG30650.066.1138151
CCGAACG18800.064.773349
TTACCCG39800.064.699741
TCCGCGA29400.062.6226168
TCGTACG35900.062.5910228
CGAACTA41450.062.3007241
CCGCTAT36650.062.2764051
Produced by FastQC (version 0.11.5)