FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005485769

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005485769
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22825364
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGAGCCT2222653597.37647557340159No Hit
NTGAGCCT2301801.0084395587294908No Hit
TNGAGCCT648600.2841575713754225No Hit
TTGAGCCA267710.11728619092339558No Hit
TTGAGCCG256750.11248451503336376No Hit
GTGAGCCT248230.10875182538162372No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)