FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005485770

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005485770
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21445125
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTCGGAT2083897097.17346016868635No Hit
NGTCGGAT2389291.1141413258257995No Hit
TGTCGGGT327350.1526454147504386No Hit
TNTCGGAT314310.14656477870844772No Hit
TGTCGGCT304040.14177581151893495No Hit
TGGCGGAT293110.13667908207576315No Hit
TGTCGGAA243710.1136435436958283No Hit
TGCCGGAT234490.10934419827350039No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)