FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005485774

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005485774
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19953437
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGAA30400.083.146711
TTACGCG11550.080.33839
TGCGCGA32050.079.323361
TTTGCGC31300.073.9677351
GTGCGAC34100.071.116971
ACGACCG29250.070.635471
ATAACGC35150.069.617871
GACGCGT31050.069.372181
CGGTACG33750.068.598231
GCGCTAG32650.068.440991
CCGCTAT37700.067.241031
CGAACGC35250.067.134071
ACGCCGA37050.066.640971
GCGCGTA32450.066.153451
AACCGCG37400.064.450141
GGCGACT41850.064.2495651
CGCGGTA37150.064.094991
TTACCCG39200.063.733521
TCACGCG27100.063.3977368
CGAACTA43250.063.355611
Produced by FastQC (version 0.11.5)