FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005485788

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005485788
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19741153
Sequences flagged as poor quality0
Sequence length8
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AACTTGAC1922475197.38413455384293No Hit
NACTTGAC2161871.0951082745774778No Hit
ANCTTGAC289010.1463997568936323No Hit
AGCTTGAC282060.14287919251727596No Hit
AACTTGAA253460.1283916901915506No Hit
CACTTGAC220070.11147778450427896No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)