FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005485829

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005485829
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23436859
Sequences flagged as poor quality0
Sequence length8
%GC62

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTCCAGA2281080097.32874187620449No Hit
NGTCCAGA2246800.9586608854027752No Hit
GNTCCAGA472780.2017249837104878No Hit
GGTCGAGA329080.1404113068223007No Hit
GGGCCAGA312330.1332644446937194No Hit
GGTCAAGA237730.10143424082553043No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)