FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005485830

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005485830
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19150960
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGACCG27250.079.77691
CGGTACG31650.075.855551
CGCCGAA26900.074.012291
TGCGCGA29300.073.945431
TTACGCG11550.072.806929
GCGCTAG31550.071.455981
TTTGCGC29450.071.083371
GTGCGAC32700.068.0476461
GACGCGT33650.066.779091
TCGACGG34900.066.694331
TAGGCGC35250.066.239771
GTACCGT44100.066.0821468
GGCGACT32350.065.8424451
GTTCGCG40750.065.644068
TTACCCG36100.064.680111
CCGCTAT35500.064.3299941
GCCGGAT38500.064.260371
CGAACGC34700.063.281831
ATAACGC36000.063.2331921
GCGCGTA29900.062.6694681
Produced by FastQC (version 0.11.5)